Analysing gametic variation with an animal model

Summary A method is presented to treat gametes as homozygous diploid individuals allowing their inclusion into the relationship matrix between animals. In this way standard techniques developed for the analysis of individual genetic variation may be used to analyze gametic variation. An example is given for maternal gametic imprinting and equivalence is shown to a gametic model. The method may also be adopted for the analysis of species (like the honey bee) with one haploid sex.AGBU is a joint initiative of UNE and the NSW Department of Agriculture     

Symposium Introductory Remarks: A Brief History of Aquatic Microbial Ecology

ABSTRACT This report serves to introduce the symposium on food chains and food webs that is jointly sponsored by the Society of Protozoologists and the Phycological Society of America. A brief history of the field of aquatic microbial ecology is presented with an emphasis on the development of theoretical models that have directed the course of research — research that has shaped the development of new and more complex models of the present. the paper aims to provide historical background for all symposium participants and an introduction to the specific presentations of the four guest speakers.     

Respiratory mucosal delivery of next-generation COVID-19 vaccine provides robust protection against both ancestral and variant strains of SARS-CoV-2

1. Download : Download high-res image (187KB)
2. Download : Download full-size image

     

Ruptured fission yeast walls

Distributions of rupture sites of fission yeast cells ruptured by glass beads have been related to a new morphometric analysis. As shown previously (Johnson et al.,Cell Biophysics, 1995), ruptures were not randomly distributed nor was their distribution dictated by geometry, rather, ruptures at the extensile end were related to cell length just as the rate of extension is related to cell length. The extension patterns of early log, mid-log, late log, and stationary phase cells from suspension cultures were found to approximate the linear growth patterns of Kubitschek and Clay (1986). The median length of cells was found to decline through the log phase in an unbalanced manner.     

Activity estimation and biokinetic analysis of 99mTc-DMSA in renal infant patients using a gamma camera

Biokinetic data from the administration of radiopharmaceuticals is essential in nuclear medicine dosimetry. It has particular significance in children, as their metabolism is very different from adults. Biokinetic models for paediatric patients could therefore need to be adapted to better reflect their absorption, retention and excretion functions, when compared to adults. Obtaining quality in vivo infant or paediatric biokinetic data is then essential to improve the available reference models, which in turn can lead to the optimization of paediatric procedures and protocols in clinical practice.This study analyses the biokinetic behaviour of ^99mTc-dimercaptosuccinic acid (DMSA), in 8 infants aged 4 months to 2 years old, through an imaging study using a gamma camera, and compares the obtained values with those obtained with the reference ICRP biokinetic model. The in vivo data was treated using an adapted methodology from the MIRD 16 pamphlet. Activity curves for the liver, the kidney and the whole body, were built, and new effective absorption, retention and excretion half-lives were estimated, and compared with the reference biokinetic parameters of ICRP 128. The obtained residence time in the kidneys of 2.56 h, has a deviation of 30.8% to the ICRP 128 value of 3.70 h. The obtained maximum uptake in the kidneys was of 0.22/A₀, which compares to the value of 0.31/A₀ for ICRP.The obtained biokinetic parameters were used to estimate the absorbed dose. The obtained dose values are smaller than the reference ICRP 128 ones by 32.1% in the kidneys, and 18.4% in the liver.     

Performance of the marginal structural models under various scenarios of incomplete marker's values: A simulation study

Marginal structural models (MSMs) have been proposed for estimating a treatment's effect, in the presence of time‐dependent confounding. We aimed to evaluate the performance of the Cox MSM in the presence of missing data and to explore methods to adjust for missingness. We simulated data with a continuous time‐dependent confounder and a binary treatment. We explored two classes of missing data: (i) missed visits, which resemble clinical cohort studies; (ii) missing confounder's values, which correspond to interval cohort studies. Missing data were generated under various mechanisms. In the first class, the source of the bias was the extreme treatment weights. Truncation or normalization improved estimation. Therefore, particular attention must be paid to the distribution of weights, and truncation or normalization should be applied if extreme weights are noticed. In the second case, bias was due to the misspecification of the treatment model. Last observation carried forward (LOCF), multiple imputation (MI), and inverse probability of missingness weighting (IPMW) were used to correct for the missingness. We found that alternatives, especially the IPMW method, perform better than the classic LOCF method. Nevertheless, in situations with high marker's variance and rarely recorded measurements none of the examined method adequately corrected the bias.     

Behavioral Phenotyping of Murine Disease Models with the Integrated Behavioral Station (INBEST)

Due to rapid advances in genetic engineering, small rodents have become the preferred subjects in many disciplines of biomedical research. In studies of chronic CNS disorders, there is an increasing demand for murine models with high validity at the behavioral level. However, multiple pathogenic mechanisms and complex functional deficits often impose challenges to reliably measure and interpret behavior of chronically sick mice. Therefore, the assessment of peripheral pathology and a behavioral profile at several time points using a battery of tests are required. Video-tracking, behavioral spectroscopy, and remote acquisition of physiological measures are emerging technologies that allow for comprehensive, accurate, and unbiased behavioral analysis in a home-base-like setting. This report describes a refined phenotyping protocol, which includes a custom-made monitoring apparatus (Integrated Behavioral Station, INBEST) that focuses on prolonged measurements of basic functional outputs, such as spontaneous activity, food/water intake and motivated behavior in a relatively stress-free environment. Technical and conceptual improvements in INBEST design may further promote reproducibility and standardization of behavioral studies.     

基于4种生态位模型的金钱松潜在适生区预测

金钱松（Pseudolarix amabilis）是我国特有孑遗植物，为国家II级保护植物。基于4种生态位模型（GARP、Bioclim、Domain和Maxent）预测金钱松潜在适生区，采用受试者工作特征曲线（Receiver Operating Characteristic，ROC）和Kappa统计量检验模型的预测效果。预测结果表明金钱松在浙江西北部、安徽南部、湖北南部、湖南北部以及江西北部表现为高度适生，并以这些地带为中心向外延伸至北纬24.43°-33.35°和东经106.41°-123.42°之间，4种模型预测结果的受试者工作特征曲线下面积（Area under recriver operating characteristic curve，AUC）平均值均大于0.9，Kappa平均值亦大于0.75，精度较高。通过"刀切法"分析得出年均温是预测金钱松潜在适生区的关键影响因子，可能为当前金钱松分布格局形成的决定因素。模拟金钱松在末次盛冰期和2070年气候条件下的分布，结果表明其分布格局随气候变化由"南扩北缩"变为"南缩北扩"，未来分布面积将大幅减小，气候变化是导致其"南缩北扩"的主要驱动因子。建议在当前金钱松高适分布区域内（江西铜鼓县、湖南张家界和衡阳）建立自然保护区或种子园，并在未来气候条件下高适分布区域内（如安徽北部、河南南部、湖北东南部等地）通过人工引种辅助金钱松的北向迁移。